Clinical genomics a guide to clinical next generation sequencing

Provides an overview of the various next-generation sequencing (NGS) technologies that are used in clinical diagnostic laboratories. This book focuses on the challenges of diagnostic interpretation of NGS results in a clinical setting

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Bibliographic Details
Other Authors: Kulkarni, Shashikant (Editor), Pfeifer, John D. (Editor)
Format: Book
Language:English
Published: Amsterdam Elsevier/Academic Press [2015]
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245 0 0 |a Clinical genomics  |b a guide to clinical next generation sequencing  |c edited by Shashikant Kulkarni, John Pfeifer 
264 1 |a Amsterdam  |b Elsevier/Academic Press  |c [2015] 
264 4 |c © 2015 
300 |a xvii, 470 pages  |b illustrations  |c 28 cm 
336 |a text  |2 rdacontent 
337 |a unmediated  |2 rdamedia 
338 |a volume  |2 rdacarrier 
504 |a Includes bibliographical references and index 
505 0 |a Overview of technical aspects and chemistries of next-generation sequencing / Ian S. Hagemann -- Clinical genome sequencing / Tina M. Hambuch, John Mayfield, Shankar Ajay, Michelle Hogue, Carri-Lyn Mead and Erica Ramos -- Targeted hybrid capture methods / Elizabeth C. Chastain -- Amplification-based methods / Marina N. Nikiforova, William A. Laframboise and Yuri E. Nikiforov -- Emerging DNA sequencing technologies / Shashikant Kulkarni and John Pfeifer -- RNA-sequencing and methylome analysis / Shamika Ketkar and Shashikant Kulkarni -- Base calling, read mapping, and coverage analysis / Paul Cliften -- Single nucleotide variant detection using next generation sequencing / David H. Spencer, Bin Zhang and John Pfeifer -- Insertions and deletions (indels) / Jennifer K. Sehn -- Translocation detection using next-generation sequencing / Haley Abel, John Pfeifer and Eric Duncavage -- Copy number variant detection using next-generation sequencing / Alex Nord, Stephen J. Salipante and Colin Pritchard -- Reference databases for disease associations / Wendy S. Rubinstein, Deanna M. Church and Donna R. Maglott -- Reporting of clinical genomics test results / Kristina A. Roberts, Rong Mao, Brendan D. O'Fallon and Elaine Lyon -- Reporting software / Rakesh Nagarajan -- Constitutional diseases: amplification-based next-generation sequencing / Vanessa L. Horner and Madhuri R. Hegde -- Targeted hybrid capture for inherited disease panels / Sami S. Amr and Birgit Funke -- Constitutional disorders: whole exome and whole genome sequencing / Benjamin D. Solomon -- Somatic diseases (cancer): amplification-based next-generation sequencing / Fengqi Chang, Geoffrey L. Liu, Cindy J. Liu and Marilyn M. Li -- Targeted hybrid capture for somatic mutation detection in the clinic / Catherine E. Cottrell, Andrew J. Bredemeyer and Hussam Al-Kateb -- Somatic diseases (cancer): whole exome and whole genome sequencing / Jennifer K. Sehn -- Assay validation / Amy S. Gargis, Lisa Kalman and Ira M. Lubin -- Regulatory considerations related to clinical next generation sequencing / Shashikant Kulkarni and John Pfeifer -- Genomic reference materials for clinical applications / Justin Zook and Marc Salit -- Ethical challenges to next-generation sequencing / Stephanie Solomon -- Legal issues / Roger D. Klein -- Billing and reimbursement / Kris Rickhoff, Andrew Drury and John Pfeifer 
520 |a Provides an overview of the various next-generation sequencing (NGS) technologies that are used in clinical diagnostic laboratories. This book focuses on the challenges of diagnostic interpretation of NGS results in a clinical setting 
592 |a 0009110/15  |b 11/8/2016  |c RM 644.43  |h Areesh 
650 0 |a Medical genetics 
650 0 |a Genomics 
650 1 2 |a Genomics 
650 2 2 |a Clinical Medicine 
700 1 |a Kulkarni, Shashikant  |e editor 
700 1 |a Pfeifer, John D.  |e editor 
999 |a vtls000056158  |c 105484  |d 105484